CDS

Accession Number TCMCG006C70088
gbkey CDS
Protein Id XP_013706551.1
Location join(57162536..57162604,57162846..57162971,57163326..57163483,57163631..57163675,57163903..57163981,57164074..57164147,57164289..57164395,57164482..57164655,57164849..57165052,57165180..57165378,57165455..57165529,57165613..57165926,57166216..57166402,57166498..57166738,57166840..57167179,57167374..57167554,57167638..57167778,57167878..57168127,57168219..57168656,57168745..57169205,57169286..57169422,57169511..57169692,57169770..57170156,57170320..57170445,57170699..57170764,57170850..57172579,57172658..57172943,57173093..57173317,57173491..57174024,57174113..57174245,57174341..57174603)
Gene LOC106410570
GeneID 106410570
Organism Brassica napus

Protein

Length 2643aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013851097.2
Definition U3 small nucleolar RNA-associated protein 20-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category V
Description Down-regulated in metastasis
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14772        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCGACCCCAGCTGATGCTCGGGCCGTGAAGTCGCTCAACACTTCCGGGGGACGTAAGAAATTCGTGTTCAAGAATCTCGCTCAGAAAGTCAATGAGATTGACATCAGCGGTTTCTTCAAGAGCCTGGAGAAGGTTAAGCCTGAGCCTTCAGAGGGCTCCTCGTTTTTCAGAGACTGCCTCGTCGAATTGAGGGAACTGAATACAGCAGAAGATTTCATCTCGTTTTACGAGGAAATGTTGCCATTTGTTCAGACTTTGCCTTTGGTTATTGAGCAAAAAGAAATAATCTTCACCAAGCTCGTCTCGAGATTACAAATGGATGCAAGATTGTCCCTGGACGCCATTCTCAGGTTGATTGCTGCTTTATCAAGAGATCTCTTGGAGGACTTTATCCCCTTCCTTCCACGGATAGTGAACTCCTTAGTGGCACTCCTAGAAAATGGTGCCAAGAAAGACGCGGATATTATCAAGCAGATATTCTCTTCATGGTGCGAGATATTAATGAATCTGCAGAAGTATCTAGTACGCGACATCGAAGGTATTCTCAGGGATACGTTGGACTTGAGGTATCATCCCAAAGACTACATCAATGAATTAATGTCAGAGTCTATGTCATTTTTGTTGAGGAATGCGCGGAATGAGCAACTTGAAAAAGGGATCAACAGGATCCTTTCCGAAGTTGCAGATCCAGCCAAACAAGATGGAGCAGTTGATTTACTTTATTATGCTATGAGAGGAACCTCTGGAAGTCTCCATTCAAAAGCCGGGAGAGTTCTCAGTTTCTTGCTGAAAGATTCAACATTATCTTTTTGTGATAATTCTCCTCAAGGCGCTGGTACAGTCGTGGGAGTTGTTAGTTCCACTTTGGAGAGATTATGCGAGGATTTGGAAGCAGACAAATTAAATGTGATGTGGAAGTGCTTGATTCAAGAAATAAACGAATCGATCAAAAACAAAAACTCTGTTCATTTAAGCCGACTGTTGAGTGTGCTTACTGCAGCTGTCAGGGTTCAGAAAGGTCTCAAGGTTCATGATTACCCATCTTTGATTCGACTTGTGGGCCTCATTGTGTCAACTTTTGTGGCTTCCTCTGAGACCGTTGTAGAAGGGGATAACCTATCTGCTGTCATTGATGAAGTTCTGCAACTGATGTTATGCACAATAAACAGAGTCACTGATTTGGAAACTGTTGCTTCGCAATGGGCTCCCATTTTTGCCGTGAAGCGTTCAAGTTTGCTGACTTTTCTGGAGGAGTTGTTGAACAAGGATCAATCGGTAGTGAAAGCCTTTACAAACAATATATTAAGTGCAATCAACAATATGATTTGGGAGTCTTCTGAGGAAGTTATTCCTCTGTTACTAACATTTTGCGAGAACCAACTAACAAGTCACGACAGAGTGACCATCGTAGATCAAACATTTGAGAAAATTCATGAGTTTCTGGAAGAAAATATCAAGAAGGTTCGACAGAACATAGAGAACACTGGATTATCTCAAACTGATGATGCCGAGTTGGCTTCCATTTGGGGAGTTGTCAACTGTTACCCTTATTTCAAAGTGGATTCGTCATTACTGATTTCCTTTAAGGATACTCTCAGACAGCATTTGACAGTGCCGGATGCAAACTCGTCTAGTGCCCCAGAATTGATGTGGCAGAGCTTACTTGGTGCTGCTTTGAGTTCATGTCACAAACTGCCGAGAAGAATCAACCACAACGATATAGAGGAAGCATTGTCTATGGCTAAAGATTACAAGTCATGCGTACAAGTGTTGACCCCCGTGGCCGATTTTTTGGACTCAATGCACAGGCTTGCGTTAGGTAATGATGACAGGTCTAAGCCACAACCAGAACTTCAAGAAGAAAAGGCTAAAGATGCTTTTGGCATATTTTCGGAAAATTTGCGCCACCCAAACAAATGCATCCGTCTTATGACGCTGAGGATTTTGTGCCATTTTGAAACATTTTCGTCCGACTCTTCTTCTGAAGAGCATCCTCCCAAGAAGAAAATGAAAACTGAGGAGACCAAAAAACCCCTTCATGAAAGGAATGTTCTTGAGTTATTACGCTCAATCGAAGAGATTGTTCCCACAGTGAATACGGAGGGGGAGTTGATCACTATGATTCATGAAATAAAAAGGAATCTCTCTGCTGGCTTGGTACATGCGGCATATTTGCAGCTAGTATTGAATGGGCTGATGGGAATATTTCATATTAGTTATACTAAGCTGTGGGGTCCAGCATCTGAGTGTCTTGAGGTTCTTCTGAGGAATCACACAGTAACTGTATGGAGTGATTTTGTTTGCTATTTGGACCAGTGCCAGCTAAAATCTGAGAAACTCGACAATCATAGTGAGAATCCGAACCACAACTTGTCAGAGAGGCCTACTGATCTGATTGGCCGTTTTAATTTATTTCTCTGTCCGCCGTCTAATAGCACAACTACTGCAACGGTGGCTACGCAGTTGCTCCAGACCTTGCAGAAAGTTCCCAAAGTTGCTCAGTCCCACGCTTCTGAGATTCTCCCTCGGTTGCTGAAGTTTCTGGGATACAACATTGAAAATCCTACGAGTGTCGGATTATTCAATGCGCAAGTTTGTAAAGGAGATGATTGGAGGAATGTTCTTAAACAGTGGTTGACTTTGCTGAAATTGATGAAAAACCCTAAGTCGTTTCAGTTCAGCGAATTTCTAAACAACGTTCTGCAGAATAGATTCCTGGACGATAATGATGCTGAACTACAAACCATTGTTCTAGAGTGCCTTCTGTTGTGGAACGACTTCTTACTCCCACACCGCGAGCATTTGTTGAAACTGATCAAACCAGAGGAATTAAGAGAAGAACTCACAACCTCGAACATGTCCGTAGACATTGAAGAAGCTCACAAATCTCTTCTTTTCTCTCTTGAAATTCGCATCCTTGCGCCAAAAGTCAGGACATTAAAGAATTTGGCTTCACGGAAGCATACAAGTATAAATCACCGGAAGGCAGTTCTTCGCTTTATAGCTGAGCGGGATGTTGATGACCTTGCCCTCTTTTTTGTATTGTTGATAAAGCCTTTGAACATCATATCAGAGGAAACAATGGACTTGTTCTGGAGTTCAGGCAAAGCTTCGCTGGATTATTTCCAAAAGGCGGATTTCTTGAAGGATTTCACTGGTGATACTATTTCTACATTATCCAAGAATCAGAAATCTGGGTTTCTTCATGTCATCCAAGACATCCTTGAAGTCTTTGATGAGCTCCGTGTCCGACCTTTTATAGACTTTTTGATGGGATGTGTTGTCCGGCTAATGGTAAACTATGAAGAAAGAAACATTGCATCATTGACACCAAGAAATGACACTGCCGCCTCATCAACCCCAGACAATAAAGAGAATGTTTCAGTTCATCAAGACCAGGCTGGCACTGCTTTGAAGCAGTTTAAAGAGTTGAGATCATTATGTCTGAAAATTATTGCTCATGTTCTTGATAAATACGAGGATTCTGATCTTGGTTCCGAGTTCTGGGACCTCTTCTTTTCGGCAGTAAATCCGTTAATTAAAAATTTCAAGCAGGAGGGTTCTAGTAGTGAGAAAACAAGTTCCTTGTTCTCATGCTTCTTGTCAATGAGTAGAAACCGCAATCTCGTGACCCTCTTATGTCGGGAAGAGTCTCTTATTCCAGACATTTGTTCGATTCTGACAGTCAACACGGCTTCAGACGCTATAAAGTCGTCTGCACTCAAGTTCATAGAGAATCTGCTTTGTCTTGACAGTGAGTTGCATGAGGATGACAGTATGATCAAAGGCTTCTTAGATCCGTACATAGAAACACTGTTCAGCAGCTTGCATTCTCTTTTCATTGGGGATATTAACAAAAGGAAATCAATCAAGTATCATGGGGAAAGAGAGATTAGGATTCTTAAATTGTTGTCAAAGCACATGGGAGATCAGTCTTGTGCTATGAAGTATTTGGAAGTCTTACTTTCTTTCTTGGATAAAAACGTGAAAGATTCTGATATCCGTCGTGAGGCTTTGCTAGCCATTCAGGACATCACATCGTTGCTTGGGACTGAGAGTGTCACCAAAATTATAAACAAAGTCTCTCCTCTACTTGTTGACGCTGAAGTTGACGTTAGATTATGCATTTGTGATCTTCTTGAATCTCTTGCAAAAATCGACTTTTCTCTGGATGATGTGGCAAAGCGCATCCGAGATATGAATTCCATCTCAGTCATGGAAGTTGATGATCTTGACTATGAAAGGATAGTTAATGCTTATGTGGAGATTGACTCGGATTTCTTTGCTAAATCCTCGAAGCAGCACACGATGATTATACTGTCACAAAGTTTATACAACTTATCATCGGAATCCATTATGTTAAGGGGAAGCGCACATAAGCTCTTGTCATCTTTCATTGAATTTTCGGCCTCAATACTATGCCAAGAAGCTTCAGCTCACTCTGGCGCTGGCAAAGAGGTCAAAATAGCTGATGCAAGCTGGACAGGAAAGCATACACTGTCCATTGTGGATTTTATCTTGAAACACATTGCTGATGCAGTAAGCAAAGGAGGCAATATAGTAAAGGAGTGGATTCTTTTGATACGTGAAATGGTGACAAAACTCCCAGATGCCGGAGATCTTGGTGCATTTAGACCTTTATGCTCTGAAGATGAGAATATTGATTTTTTTAAATCTATTATTCACATTCAGTCACACCGTAGAGCAAAGGCGATTTCACGTTTCGCAAAAGTGGTCGGAGATAGCAGCCTGCCTGAGGGAGTCTTGAGAAAACTGTTTGTCGCTGTCTTTTTCCACATGTTGCTCGATGGACAAGATGTAAAAGAAAAAGAGAACAATGTCCGTAATGCATGCACAGAGGCCCTTGCATCTGTATCTGCACATATGAGTTGGAAGTCGTACTATGCTCTATTGAATCGGTGTTTCCGTGAGATGCACAATCATACCAAAAAGGGAAAGCTTCTGCTGCGGCTTATCTGCTTGATTTTGGATAAATTTCATTTTACAGAAGATGGTGGTTACAGGCAAGAGGAGATTGAGGGGATTCATAAAAGCCTTCAAACTGTGTTTGGAAAGATGCAGAAGCTGATGGATTCTGAGTCTGACAATGTTAATGTTAACAGCAGTGTGGCTGCGCTGAAGGTTCTAAAGCTGCTTCCCAAAGACGTAATGGACGATTATCTGTCCCCTATAATTAAGAGGATTGCCACTTTTACGAAGAACCGGTTGGAGAGCACACGTGGTGAAGCCAGATCTGCTCTGGTTGCTTGTTTGAAGGAATTGGGGCTCGAGTACTTGCAGGTTGTCATCAAAAGTTTACGTGATATCCTGAAACGAGGATCTGAGTTGCACGTGCTGGGATACACCGTCCATTCTATCTTATCGAAGTGCTTGTCCAAACCTACGTGTGGGAAGTTGGATCATTGTTTGGATGATCTCCTTGCTGTGGTTGAAACCGATATCTTTGGAGTGGTTGCTGAACAGAAAGATGTGGATAAATTCAAATCCAAAATGAAAGAGACAGGAAAAAGCATGTCATTCGAGACTCTGAAGTTGATTTCTGAAAATGTAACGTTCAGAGAACATGCATTGAAATTACTGTCTCCGGTCACTGCTCAGCTGCGGTGGCATCTAACTCCAAAGATAAAACCAGATCTGGTGAAGATGTTACAACACATTGCAGTTGGTATTGAAGGCAATCCATCTGTTGACCAAGTAGATCTTTTTGTTTTTATATATGGTTGTGTTGATGATGGCATTAACAACAGAAATGGTCTTGGAGATCAAGGGTCTTCTCCCCCATCCAAAAAGAAAAGGAAATCAAGAGATGAGACTGTTGGGTTGATTTCTGGTGCTATGTCTTGTCCACATCTTATAACAGTGTTTGCTCTGGACTTACTGCAAAACAGACTGAAGAAAATTAAACTCCACAACACTGATAAAGAGCTGCTGGGGAAGTTAGATTCGTTTATTAGACTACTTACTGAATGCTTGCGTTCTAAGTATGAAGAGATTGTCTCATCAGCCCTTAGATGTTTCACTTCGTTAATATGGTTTCCACTGCCTTCCCTCATGTCTGGAGCAGAAGAGTTGAAAACATCATTGTTGACAATTGCTCAGTCTGCAGTGGATTCCAGCAGTTCTCTTGTGCGGTCATGCCTTAAGCTTTTAACAACGCTCCTCGGTAATAAAAACATAACTTTGTCACAGGAGCAGTTAAAGTTGGTGATTCGGTTCCCCATGTTTGCTGATCTGGAGTCCGATCCATCCTTTGTTGCCTTTTCACTCCTCAAGGCCATTGTGAAACGAAAACTTGTGGTTCCAGAGATTTATGACGTTGCACTTCAGGTTTCAGAGTTGTTGGTAAAAAGTCAGCTGGACTCAATCCAAAAGAAATGCAAAGAGATACTGTTACAGTTTTTGGTCCACTACCCACTTTCTGAGAAACGTTTACAGCAACACGTGGAATTTCTGCTGCAAAATCTGAGGTATGAACATCCAACAGGAAGAGAAGCAGTCCTTGACATGCTTTATGCTCTTATCTTGAAATTCTCAGATCGCGGCAAGGAGTCAGTTCTTGACAGCCAGTGGAGAACAATGCTTATTAAGCTTGCTCCGTGTTTGGGCACCGATACTAATAAACAAGTGCTTTCCCGGATCGGTTCTGTGATAACACTTCTGATAAATTGCATCAGTGAAGATCAAGTTGGTTCCGTTATCTCGGTTTGTCTGTGTTGGTATAAGCAGCAGAGGGTACAGGCTGTCGCAGCACAGGTGTTGGGATTTATAATTGACGCTAAGAGGAATCAATTTCAAAAGCATATCCACAATACATTGGAGGATGCCAAAGTGATAATGGAGTCTGCTCTCAGTGCTTCCAGCCTGCATAATGTTGAGGAAGGCGTTATTCCGTTCTGGAAGGAAGCATACCACTCCCTGATTATGATAGAGAAGATGGTCGGGCAATTTCCTTATTTAAAACTCAAAAAAGATTTAGAGGATGTTTGGAAAATGGTATTTAAGTTCTTGTTGCACCCACACGCATGGTTAAGAAGTAAATCCTGCCGGCTACTGAATTATTATTTCAAGGCATTGGCTAGGAGGAAAAGAGCAGAATCTCAGATAGTAGTATCTGATTCTCTTCTTGAGAACCCAAGTAGCCTGTTCTCGGTTGCTGTTTCTCTTTGCTCCCAGTTAAAGGAGCTACCCACCACAGGGGATGACATTGAAGATCTCCTCATAGAAAATATTGTTTTTGCGGTCTCGAGTCTTCATTCCCTGATTGGACATTCTGTTCAAGCAACAGACGATGGGTTCTGGTCCAGTCTTGGCGAGGATGAGCAAGTGGTGTTCCTAAAAGCCTTTGAAGTGCTTGATTCGGGTAAGGGAAGGTCTACGTTTCTGTCTCTTACCTCAGGCAAACGTACTGATAACGGCGAGGAGGAGGATGCTGCGAGTGGTGTAAGGAATGTATTGATTGGAAGCTTGCTCAAGAGGCTCGGGAAGGTTGCTCTTGATACGGAGTCTGTTCAGATGAAGATTGTGTTCAACGTCTACAAAGCATTCACCTCACAGATGAATCAAGTAGAATGTCGTTTATATGCCTACAAAATTCTGCTTCCATTGTACAAAGTCTGCGAAGGTTTCACAGGAAAGATCATCTCAGATGAGTCTAAACAACTAGCAGAGGAGGTACGAGACAGTATAAGAGACAATACTTTAGGCAACCAACTGTTTGTGGAGGTTTACAGTGAGATAAGGAAAAGTCTGAGAAACAAGAGGGAGAAGAGAAAGAGAGAAGAAAAGACAATGGCAGTGGTGAATCCAGAGAGAAATGCAAAGAGGAAACTGAGGTTAGCTTCAAAGAACAAAGCCAACAAGAGGAGGAGGATGACAAGCATGAAGTTATCTAGATGGGCTCGCTCTTGA
Protein:  
MATPADARAVKSLNTSGGRKKFVFKNLAQKVNEIDISGFFKSLEKVKPEPSEGSSFFRDCLVELRELNTAEDFISFYEEMLPFVQTLPLVIEQKEIIFTKLVSRLQMDARLSLDAILRLIAALSRDLLEDFIPFLPRIVNSLVALLENGAKKDADIIKQIFSSWCEILMNLQKYLVRDIEGILRDTLDLRYHPKDYINELMSESMSFLLRNARNEQLEKGINRILSEVADPAKQDGAVDLLYYAMRGTSGSLHSKAGRVLSFLLKDSTLSFCDNSPQGAGTVVGVVSSTLERLCEDLEADKLNVMWKCLIQEINESIKNKNSVHLSRLLSVLTAAVRVQKGLKVHDYPSLIRLVGLIVSTFVASSETVVEGDNLSAVIDEVLQLMLCTINRVTDLETVASQWAPIFAVKRSSLLTFLEELLNKDQSVVKAFTNNILSAINNMIWESSEEVIPLLLTFCENQLTSHDRVTIVDQTFEKIHEFLEENIKKVRQNIENTGLSQTDDAELASIWGVVNCYPYFKVDSSLLISFKDTLRQHLTVPDANSSSAPELMWQSLLGAALSSCHKLPRRINHNDIEEALSMAKDYKSCVQVLTPVADFLDSMHRLALGNDDRSKPQPELQEEKAKDAFGIFSENLRHPNKCIRLMTLRILCHFETFSSDSSSEEHPPKKKMKTEETKKPLHERNVLELLRSIEEIVPTVNTEGELITMIHEIKRNLSAGLVHAAYLQLVLNGLMGIFHISYTKLWGPASECLEVLLRNHTVTVWSDFVCYLDQCQLKSEKLDNHSENPNHNLSERPTDLIGRFNLFLCPPSNSTTTATVATQLLQTLQKVPKVAQSHASEILPRLLKFLGYNIENPTSVGLFNAQVCKGDDWRNVLKQWLTLLKLMKNPKSFQFSEFLNNVLQNRFLDDNDAELQTIVLECLLLWNDFLLPHREHLLKLIKPEELREELTTSNMSVDIEEAHKSLLFSLEIRILAPKVRTLKNLASRKHTSINHRKAVLRFIAERDVDDLALFFVLLIKPLNIISEETMDLFWSSGKASLDYFQKADFLKDFTGDTISTLSKNQKSGFLHVIQDILEVFDELRVRPFIDFLMGCVVRLMVNYEERNIASLTPRNDTAASSTPDNKENVSVHQDQAGTALKQFKELRSLCLKIIAHVLDKYEDSDLGSEFWDLFFSAVNPLIKNFKQEGSSSEKTSSLFSCFLSMSRNRNLVTLLCREESLIPDICSILTVNTASDAIKSSALKFIENLLCLDSELHEDDSMIKGFLDPYIETLFSSLHSLFIGDINKRKSIKYHGEREIRILKLLSKHMGDQSCAMKYLEVLLSFLDKNVKDSDIRREALLAIQDITSLLGTESVTKIINKVSPLLVDAEVDVRLCICDLLESLAKIDFSLDDVAKRIRDMNSISVMEVDDLDYERIVNAYVEIDSDFFAKSSKQHTMIILSQSLYNLSSESIMLRGSAHKLLSSFIEFSASILCQEASAHSGAGKEVKIADASWTGKHTLSIVDFILKHIADAVSKGGNIVKEWILLIREMVTKLPDAGDLGAFRPLCSEDENIDFFKSIIHIQSHRRAKAISRFAKVVGDSSLPEGVLRKLFVAVFFHMLLDGQDVKEKENNVRNACTEALASVSAHMSWKSYYALLNRCFREMHNHTKKGKLLLRLICLILDKFHFTEDGGYRQEEIEGIHKSLQTVFGKMQKLMDSESDNVNVNSSVAALKVLKLLPKDVMDDYLSPIIKRIATFTKNRLESTRGEARSALVACLKELGLEYLQVVIKSLRDILKRGSELHVLGYTVHSILSKCLSKPTCGKLDHCLDDLLAVVETDIFGVVAEQKDVDKFKSKMKETGKSMSFETLKLISENVTFREHALKLLSPVTAQLRWHLTPKIKPDLVKMLQHIAVGIEGNPSVDQVDLFVFIYGCVDDGINNRNGLGDQGSSPPSKKKRKSRDETVGLISGAMSCPHLITVFALDLLQNRLKKIKLHNTDKELLGKLDSFIRLLTECLRSKYEEIVSSALRCFTSLIWFPLPSLMSGAEELKTSLLTIAQSAVDSSSSLVRSCLKLLTTLLGNKNITLSQEQLKLVIRFPMFADLESDPSFVAFSLLKAIVKRKLVVPEIYDVALQVSELLVKSQLDSIQKKCKEILLQFLVHYPLSEKRLQQHVEFLLQNLRYEHPTGREAVLDMLYALILKFSDRGKESVLDSQWRTMLIKLAPCLGTDTNKQVLSRIGSVITLLINCISEDQVGSVISVCLCWYKQQRVQAVAAQVLGFIIDAKRNQFQKHIHNTLEDAKVIMESALSASSLHNVEEGVIPFWKEAYHSLIMIEKMVGQFPYLKLKKDLEDVWKMVFKFLLHPHAWLRSKSCRLLNYYFKALARRKRAESQIVVSDSLLENPSSLFSVAVSLCSQLKELPTTGDDIEDLLIENIVFAVSSLHSLIGHSVQATDDGFWSSLGEDEQVVFLKAFEVLDSGKGRSTFLSLTSGKRTDNGEEEDAASGVRNVLIGSLLKRLGKVALDTESVQMKIVFNVYKAFTSQMNQVECRLYAYKILLPLYKVCEGFTGKIISDESKQLAEEVRDSIRDNTLGNQLFVEVYSEIRKSLRNKREKRKREEKTMAVVNPERNAKRKLRLASKNKANKRRRMTSMKLSRWARS